Index

A | C | D | F | G | I | M | P | R | T | U

A

appendhdf5() (in module petlx.hdf5)

C

collapsedintervals() (in module petlx.interval)
create_table() (in module petlx.sql)

D

display() (in module petlx.ipython)
displayall() (in module petlx.ipython)
drop_table() (in module petlx.sql)

F

facetintervallookup() (in module petlx.interval)
facetintervallookupone() (in module petlx.interval)
facetintervalrecordlookup() (in module petlx.interval)
facetintervalrecordlookupone() (in module petlx.interval)
fromarray() (in module petlx.array)
fromdataframe() (in module petlx.dataframe)
fromgff3() (in module petlx.gff3)
fromhdf5() (in module petlx.hdf5)
fromhdf5sorted() (in module petlx.hdf5)
fromtabix() (in module petlx.tabix)
fromvcf() (in module petlx.vcf)
fromxls() (in module petlx.xls)
fromxlsx() (in module petlx.xlsx)

G

gff3join() (in module petlx.gff3)
gff3leftjoin() (in module petlx.gff3)
gff3lookup() (in module petlx.gff3)

I

intervaljoin() (in module petlx.interval)
intervaljoinvalues() (in module petlx.interval)
intervalleftjoin() (in module petlx.interval)
intervallookup() (in module petlx.interval)
intervallookupone() (in module petlx.interval)
intervalrecordlookup() (in module petlx.interval)
intervalrecordlookupone() (in module petlx.interval)
intervalsubtract() (in module petlx.interval)

M

make_create_table_statement() (in module petlx.sql)
make_sqlalchemy_column() (in module petlx.sql)
make_sqlalchemy_table() (in module petlx.sql)
meltsamples() (in module petlx.vcf)

P

petlx (module)
petlx.array (module)
petlx.dataframe (module)
petlx.gff3 (module)
petlx.hdf5 (module)
petlx.interval (module)
petlx.ipython (module)
petlx.sql (module)
petlx.tabix (module)
petlx.vcf (module)
petlx.xls (module)
petlx.xlsx (module)

R

recordtree() (in module petlx.interval)
recordtrees() (in module petlx.interval)

T

toarray() (in module petlx.array)
todataframe() (in module petlx.dataframe)
todb() (in module petlx.sql)
tohdf5() (in module petlx.hdf5)
torecarray() (in module petlx.array)
toxls() (in module petlx.xls)
toxlsx() (in module petlx.xlsx)
tupletree() (in module petlx.interval)
tupletrees() (in module petlx.interval)

U

unpackcall() (in module petlx.vcf)
unpackinfo() (in module petlx.vcf)